The 2021 Nobel Chemistry Prize

 

Selleaastased keemianobelistid Benjamin List ja David MacMillan.

We were very pleased to learn today that the the Nobel Prize in Chemistry 2021 was awarded to Benjamin List (Max-Planck-Institut für Kohlenforschung, Mülheim an der Ruhr, Germany) and David W.C. MacMillan (Princeton University, USA) “for the development of asymmetric organocatalysis”!

The List group is world-famous for developing superacidic organocatalysts, enabling a very wide range of challenging transformations. We are happy that there is also a tiny contribution from our group to prof. List’s research: the acidities (expressed as pKa values in acetonitrile of 1,2-dichloroethane) of some of their acid catalysts (1,1,3,3-Tetratriflylpropene and some chiral superacidic imides) have been measured in our lab. Recently we were happy to host people from the List group in our lab and they learned how to carry out pKa measurements in nonaqueous solutions. The collaboration will continue.

Big congratulations to prof. List and to prof. MacMillan!

(Photo: The Nobel Prize committee)

Design of Novel Uncharged Organic Superbases: Merging Basicity and Functionality

Emerging organosuperbase families
Examples of emerging organosuperbase families

In a recent account Design of Novel Uncharged Organic Superbases: Merging Basicity and Functionality. Acc. Chem. Res. 2021, 54, 3108-3123 four groups doing research at the forefront of superbase chemistry – IOCB (Czech Republic), Rudjer Boskovic Institute (Croatia), Philipps-Universität Marburg (Germany) and our group at University of Tartu – have joined forces in charting the direction for further developments of the whole organosuperbases area. What synthetic chemists need, are “non-ionic, metal-free superbases as chemically stable neutral organic compounds of moderate molecular weight, with intrinsically high thermodynamic basicity, adaptable kinetic basicity, and weak or tunable nucleophilicity at their basicity centres”. Such superbases would be are useful, being able to catalyze a number of reactions that are impossible otherwise.

The account demonstrates that just trying to achieve ever higher basicity is not the main challenge. Very high basicities have been demonstrated, both computationally and experimentally. Instead, the combination of high basicity with moderate molecular weight, ease of synthesis and stability is the key issue.

The account starts with the state of the art of neutral organic superbase research, theirs synthesis and basicity measurements, as well as computations and thereafter presents several examples of emerging organosuperbase families (see the Figure on the left) and discusses their synthesis, basicity and demonstrated, as well as potential applications.

Dr. Eliise Tammekivi – PhD thesis on the quantitative analysis of oils

Last Friday, on August 27, 2021, Eliise Tammekivi successfully defended her PhD thesis titled Derivatization and quantitative gas-chromatographic analysis of oils.

In the PhD thesis by Eliise, four derivatization procedures that are widely used for the analysis of oils in cultural heritage or archaeology were compared based on quantitative gas-chromatographic (GC) analysis. It was seen that the TMTFTH derivatization was the most suitable one for the GC analysis of fresh oils. An in-depth uncertainty estimation was performed for one of the derivatization procedures using the ISO GUM approach and the Monte Carlo method. Another one of the improved procedures was applied for the analysis of self-made artificially aged paint samples that had varying pigment to linseed oil ratio to see if the pigment concentration had an effect on the drying of the paint samples.

Additionally, small samples from two paint case study samples relevant to the history of Estonia – crucifix from Karja church and cupboard from Ruhnu island – were analyzed to obtain information about the materials in the paint samples. Finally, the improved quantitative method was used to quantify fatty acids present in yeast cells. 

Congratulations to you, Eliise!  

 

Acidity scale in acetonitrile: 231 pKa values spanning 30 orders of magnitude

The equilibrium acidity scale (pKa scale) in acetonitrile (MeCN) has been supplemented by numerous new compounds and new ΔpKa measurements and has been published in Eur. J. Org. Chem. 2021, 1407–1419 (Open access). The pKa scale now contains altogether 231 acids – over twice more than published previously – linked by 566 ΔpKa measurements and spans between the pKa values of hydrogen iodide (2.8) and indole (32.57), covering close to 30 orders of magnitude. The acids have wide structural variety, ranging from common families – phenols (e.g. picric acid, alizarin, polyhalogenophenols), carboxylic acids (e.g. acetic, benzoic, retinoic and sorbic acid), sulfonic acids, hydrogen halides) to highly special molecules (chiral BINOL catalysts, bis(benzoxazole-2-yl)methanes, polyfluorinated compounds) and superacids (fluorinated sulfonimides, cyanoform, tetracyanopropenes).

Measurement results acquired over the last 15 years were added to the scale and new least squares treatment was carried out. The treatment yielded revised pKa values for the compounds published previously, with the root mean square difference between revised and previous values 0.04, demonstrating very good stability of the scale.

Correlation equations were developed for estimating pKa values for the studied types of compounds in water, DMSO, DMF and 1,2-dichloroethane on the basis of pKa values in acetonitrile. These equations enable predicting pKa values with an average error around or less than 1 pKa unit, which is a sufficient accuracy for many applications.

The scale is expected to be a useful tool for the widest possible research areas in organic chemistry, electrochemical power sources, catalysis, etc.

Measurement uncertainty online course 2020: highest ever completion rate: 55%!

On May 12, 2020 the on-line course (MOOC) Estimation of measurement uncertainty in chemical analysis offered by University of Tartu finished successfully.
Eventually altogether 843 people registered (270 in 2014, 489 in 2015, 757 in 2016, 363 in 2017, 521 in 2018, 590 in 2019) from 95 countries (a number of participants joined after the start of the course). 600 participants actually started the course (i.e. tried at least one graded test at least once) and out of them 464 successfully completed the course (141 in 2014, 169 in 2015, 308 in 2016, 148 in 2017, 358 in 2018, 238 in 2019). The overall completion rate was 55% (52% in 2014, 34% in 2015, 40% in 2016, 41% in 2017, 42% in 2018, 40% in 2019). The completion rate of participants who started the studies was 77% (67% in 2014, 60% in 2015, 67% in 2016, 68% in 2017, 61% in 2018, 62% in 2019). The completion rate this year is the best we have seen and can be considered excellent for a MOOC, especially one that has quite difficult calculation exercises, which need to be done correctly for completing the course.

The participants were very active and asked lots of questions. The questions were often very much to the point and addressed things that are really important to analysts in their everyday work. The course has several forums (general and by topic) and during the course period the overall number of forum posts was close to 600 (!) (overall number of posts, both from participants and from teachers) and the forums are still active and posts are still coming in.

This active participation made teaching of this MOOC a great experience also for us, the teachers. The discussion threads gave a lot of added value to the course and some of them triggered making important modifications to the course materials, even during the course.

We want to thank all participants for helping to make this course a success!

We plan to repeat this course again in Spring 2021.

 

Measurement Uncertainty online course, Mar 24 – May 5, 2020: Registration is open!

The 2020 edition of the web course (MOOC) Estimation of Measurement Uncertainty in Chemical Analysis will be running during Mar 24 – May 5, 2020. Registration is open!

The full course material (as well as the registration link) is accessible from the web page https://sisu.ut.ee/measurement/uncertainty. The course materials include videos, schemes, calculation files and numerous self-tests (among them also full-fledged measurement uncertainty calculation exercises) and examples. Almost all areas of analytical chemistry are addressed, ranging from simple titrations to sophisticated instrumental analysis, such as determining pesticide residues by LC-MS.

In order to pass the course, the registered participants have to take six graded tests and get higher than 50% score in every graded test. These tests are available to registered participants via the Moodle e-learning platform. Participants who successfully pass the course will get a certificate from University of Tartu. A digital certificate of completion is free of charge. A certificate of completion on paper can be requested for a fee of 60 euros.

You are welcome to distribute this message to potentially interested people!

 

Highly Acidic Conjugate‐Base‐Stabilized Enantioselective Carboxylic Acid Catalysts

We recently had the pleasure of collaborating with the group of Daniel Seidel (University of Florida) in the field of enantioselective acidic catalysis. Prof. Seidel and his co-workers have developed Highly Acidic Conjugate‐Base‐Stabilized Enantioselective Carboxylic Acid Catalysts that are able to catalyze oxa‐Pictet–Spengler Reactions with Ketals. Our task in this endeavor was determining the acidity of the catalysts involved and elucidating the effect of the different elements of its substitution scheme on acidity. The main outcome is summarized in the scheme on the left. As can be seen, the most acidifying element is the substituted thiourea moiety, leading to one of the catalysts – the rightmost molecule. The findings strongly suggest that a key to the high acidity is the intramolecular hydrogen bond stabilizing the anion of the acid catalyst. These same substituents are also instrumental in the enantioselective catalytic ability of these catalysts.

This work has been published in Angew. Chem. Int. Edit. 2019.

LC-MS Method Validation web course: 511 participants from 77 countries!

On Tuesday, November 26, 2019 the web course LC-MS Method Validation was launched by our group for the fourth time as a MOOC (Massive Online Open Course). There are 511 registered participants (the largest number ever in this course) from 77 countries, ranging from Guatemala to Azerbaijan and from Finland to Sudan. Image on the left shows the countries where the participants come from.

This is a practice-oriented on-line course on validation of analytical methods, specifically using LC-MS as technique. The course introduces the main concepts and mathematical apparatus of validation, covers the most important method performance parameters and ways of estimating them. The LC-MS validation course is delivered by a team of 8 teachers form our group, each with their own specific area of competence. This way it is expected to offer the best possible knowledge in all the different subtopics of analytical method validation.

The full set of course materials is accessible from the web page https://sisu.ut.ee/lcms_method_validation/. The course materials include videos, schemes, calculation files and numerous self-tests (among them also full-fledged calculation exercises). In order to pass the course the registered participants have to take all tests and get higher than 50% score from each of them. These tests are available to registered participants via the Moodle e-learning platform. Participants who successfully pass the course will get a certificate from the University of Tartu.

 

Minireview on pKa values of bases in non-aqueous solvents

In a recent minireview, published in Eur. J. Org. Chem. an important part of our group’s acid-base chemistry research has been summarized: the pKa values of bases (pKaH values) determined over the years in acetonitrile have now been rigorously united into a single scale, whereby all the involved ΔpKa values have been considered for deriving the absolute pKaH values of the bases involved. Altogether 279 basic compounds are included in the scale from all major groups of organic bases (amines, pyridines, imidazoles, anilines, amidines, guanidines, phosphazenes, etc) and are linked with altogether 682 ΔpKa measurements. The full scale can be downloaded by clicking on the picture on the left. The minireview also presents possibilities to predict the pKa values of bases in other media – namely water, DMSO and THF – on the basis of MeCN pKaH values. It is expected that this minireview will be a useful tool for future researchers who need pKa values of bases in nonaqueous solvents for planning their studies or for interpreting research results.  

Our acid-base research at 19th European Symposium on Fluorine Chemistry 2019

On 26.08.19 at 19th European Symposium on Fluorine Chemistry 2019 Ivo Leito gave a talk Acidities of molecules and media: the united pKa-pHabs scale in 1,2-dichloroethane.

For the first time in a low-polarity solvent, the scale has a dual nature, being both a pKa scale of the involved acids (i.e. describing acidity of molecules) and at the same time a pH scale, describing the acidity of the solutions (media).

The scale spans 28 orders of magnitude (pH or pKa units) and is composed of 87 acids of diverse nature. The scale is linked to the unified acidity (pHabs) scale and expressed in values, which makes the acidities of the solutions directly comparable to the conventional aqueous pH scale. This in turn makes the scale a useful tool in future studies of acid-driven processes (reaction mechanisms, catalysis, strong oxidants, etc) in low-polarity media.

This work has been published in: Chem. Sci., 2017, 8, 6964-6973. A unified view to Brønsted acidity scales: do we need solvated protons?.

It is part of a larger endeavor – to promote a wider usage the unified pH scale by the research and technology communities, which is currently in progress via the UnipHied. The project is funded from the EMPIR programme (project 17FUN09) co-financed by the Participating States and from the European Union’s Horizon 2020 research and innovation programme.